#include <pool_util.hh>

Collaboration diagram for protocols::canonical_sampling::mc_convergence_checks::DataBuffer:

Public Member Functions
	DataBuffer ()

	~DataBuffer ()

void	setup (int num_slave_nodes, int nresidues, int nlevels)

void	address_to_buf (utility::vector1< core::Size > &address, int *buf, core::Size start_index)

void	buf_to_address (utility::vector1< core::Size > &address, int *buf, core::Size start_index)

void	farray_to_array (core::Size index, FArray2D_double const &coords, double *coord_buf)

void	farray_to_array (core::Size index, core::Size num_to_add, FArray2D_double const &coords, double *coord_buf)

void	array_to_farray (core::Size index, FArray2D_double &coords, double *coord_buf)

void	array_to_farray (core::Size index, core::Size num_to_add, FArray2D_double &coords, double *coord_buf)

Public Attributes
int *	neighbor_addresses_

double *	coords_transfer_buffer_

double *	coords_receiving_buffer_

FArray2D_double	coords_

FArray2D_double	temp_coords_

core::Size	num_new_neighbors_

int *	memory_offset_

int *	int_buf1_

int *	winning_ranks_

FArray2D_double	candidate_coords_

core::Size	candidate_nbr_index_

core::Real	candidate_best_rmsd_

double *	candidate_best_rmsds_

Address	candidate_address_

std::string	winning_tag_

Address	winning_address_

core::Size	new_level_begins_

utility::vector1< core::Real >	best_candidate_rmsds_

utility::vector1< bool >	is_a_neighbor_

int *	finished_

Detailed Description

Definition at line 28 of file pool_util.hh.

Constructor & Destructor Documentation

protocols::canonical_sampling::mc_convergence_checks::DataBuffer::DataBuffer ( )

Definition at line 36 of file pool_util.cc.

protocols::canonical_sampling::mc_convergence_checks::DataBuffer::~DataBuffer ( )

Definition at line 81 of file pool_util.cc.

References candidate_best_rmsds_, coords_receiving_buffer_, coords_transfer_buffer_, finished_, int_buf1_, memory_offset_, neighbor_addresses_, and winning_ranks_.

Member Function Documentation

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::address_to_buf	(	utility::vector1< core::Size > &	address,
		int *	buf,
		core::Size	start_index
	)

Definition at line 93 of file pool_util.cc.

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::array_to_farray	(	core::Size	index,
		FArray2D_double &	coords,
		double *	coord_buf
	)

Definition at line 143 of file pool_util.cc.

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::array_to_farray	(	core::Size	index,
		core::Size	num_to_add,
		FArray2D_double &	coords,
		double *	coord_buf
	)

Definition at line 129 of file pool_util.cc.

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::buf_to_address	(	utility::vector1< core::Size > &	address,
		int *	buf,
		core::Size	start_index
	)

Definition at line 100 of file pool_util.cc.

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::farray_to_array	(	core::Size	index,
		FArray2D_double const &	coords,
		double *	coord_buf
	)

Definition at line 122 of file pool_util.cc.

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::farray_to_array	(	core::Size	index,
		core::Size	num_to_add,
		FArray2D_double const &	coords,
		double *	coord_buf
	)

Definition at line 108 of file pool_util.cc.

void protocols::canonical_sampling::mc_convergence_checks::DataBuffer::setup	(	int	num_slave_nodes,
		int	nresidues,
		int	nlevels
	)

Definition at line 59 of file pool_util.cc.

References candidate_address_, candidate_best_rmsds_, candidate_coords_, coords_, coords_receiving_buffer_, coords_transfer_buffer_, finished_, int_buf1_, is_a_neighbor_, memory_offset_, neighbor_addresses_, num_new_neighbors_, temp_coords_, protocols::canonical_sampling::mc_convergence_checks::TR(), winning_address_, and winning_ranks_.

Member Data Documentation

utility::vector1< core::Real > protocols::canonical_sampling::mc_convergence_checks::DataBuffer::best_candidate_rmsds_

Definition at line 83 of file pool_util.hh.

Address protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_address_

Definition at line 79 of file pool_util.hh.

Referenced by setup().

core::Real protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_best_rmsd_

Definition at line 77 of file pool_util.hh.

double* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_best_rmsds_

Definition at line 78 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

FArray2D_double protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_coords_

Definition at line 75 of file pool_util.hh.

Referenced by setup().

core::Size protocols::canonical_sampling::mc_convergence_checks::DataBuffer::candidate_nbr_index_

Definition at line 76 of file pool_util.hh.

FArray2D_double protocols::canonical_sampling::mc_convergence_checks::DataBuffer::coords_

Definition at line 68 of file pool_util.hh.

Referenced by setup().

double* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::coords_receiving_buffer_

Definition at line 67 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

double* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::coords_transfer_buffer_

Definition at line 66 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::finished_

Definition at line 85 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::int_buf1_

Definition at line 72 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

utility::vector1< bool > protocols::canonical_sampling::mc_convergence_checks::DataBuffer::is_a_neighbor_

Definition at line 84 of file pool_util.hh.

Referenced by setup().

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::memory_offset_

Definition at line 71 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::neighbor_addresses_

Definition at line 65 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

core::Size protocols::canonical_sampling::mc_convergence_checks::DataBuffer::new_level_begins_

Definition at line 82 of file pool_util.hh.

core::Size protocols::canonical_sampling::mc_convergence_checks::DataBuffer::num_new_neighbors_

Definition at line 70 of file pool_util.hh.

Referenced by setup().

FArray2D_double protocols::canonical_sampling::mc_convergence_checks::DataBuffer::temp_coords_

Definition at line 69 of file pool_util.hh.

Referenced by setup().

Address protocols::canonical_sampling::mc_convergence_checks::DataBuffer::winning_address_

Definition at line 81 of file pool_util.hh.

Referenced by setup().

int* protocols::canonical_sampling::mc_convergence_checks::DataBuffer::winning_ranks_

Definition at line 73 of file pool_util.hh.

Referenced by setup(), and ~DataBuffer().

std::string protocols::canonical_sampling::mc_convergence_checks::DataBuffer::winning_tag_

Definition at line 80 of file pool_util.hh.

The documentation for this struct was generated from the following files:

src/protocols/canonical_sampling/mc_convergence_checks/pool_util.hh
src/protocols/canonical_sampling/mc_convergence_checks/pool_util.cc

Public Member Functions

Public Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation