methods → core Relation

File in src/protocols/forge/methods	Includes file in src/core
chainbreak_eval.cc	scoring / methods / ChainbreakEnergy.hh
chainbreak_eval.cc	scoring / EnergyMap.hh
chainbreak_eval.cc	kinematics / FoldTree.hh
chainbreak_eval.cc	scoring / methods / LinearChainbreakEnergy.hh
chainbreak_eval.cc	kinematics / MoveMap.hh
chainbreak_eval.cc	pose / Pose.hh
chainbreak_eval.cc	scoring / ScoreFunction.hh
chainbreak_eval.cc	scoring / ScoreType.hh
chainbreak_eval.hh	pose / Pose.fwd.hh
chainbreak_eval.hh	types.hh
fold_tree_functions.cc	conformation / Conformation.hh
fold_tree_functions.cc	graph / DisjointSets.hh
fold_tree_functions.cc	kinematics / Edge.hh
fold_tree_functions.cc	kinematics / FoldTree.hh
fold_tree_functions.cc	kinematics / MoveMap.hh
fold_tree_functions.cc	pose / Pose.hh
fold_tree_functions.cc	conformation / Residue.hh
fold_tree_functions.cc	types.hh
fold_tree_functions.cc	pose / util.hh
fold_tree_functions.cc	chemical / VariantType.hh
fold_tree_functions.hh	kinematics / Edge.hh
fold_tree_functions.hh	kinematics / FoldTree.hh
fold_tree_functions.hh	kinematics / MoveMap.fwd.hh
fold_tree_functions.hh	pose / Pose.fwd.hh
fold_tree_functions.hh	types.hh
fragment_functions.cc	fragment / ConstantLengthFragSet.hh
fragment_functions.cc	fragment / FrameIterator.hh
fragment_functions.cc	fragment / FrameIteratorWorker_.hh
fragment_functions.hh	fragment / ConstantLengthFragSet.fwd.hh
fragment_functions.hh	fragment / FrameIterator.fwd.hh
fragment_functions.hh	types.hh
pose_mod.cc	conformation / Conformation.hh
pose_mod.cc	id / DOF_ID.hh
pose_mod.cc	scoring / Energies.hh
pose_mod.cc	kinematics / FoldTree.hh
pose_mod.cc	pack / task / operation / OptCysHG.hh
pose_mod.cc	pack / pack_rotamers.hh
pose_mod.cc	pack / task / PackerTask.hh
pose_mod.cc	scoring / ScoreFunction.hh
pose_mod.cc	scoring / ScoreFunctionFactory.hh
pose_mod.cc	pack / task / TaskFactory.hh
pose_mod.cc	chemical / VariantType.hh
pose_mod.hh	chemical / AA.hh
pose_mod.hh	chemical / Adduct.fwd.hh
pose_mod.hh	chemical / Adduct.hh
pose_mod.hh	kinematics / tree / Atom.fwd.hh
pose_mod.hh	conformation / Atom.fwd.hh
pose_mod.hh	kinematics / tree / Atom.hh
pose_mod.hh	conformation / Atom.hh
pose_mod.hh	chemical / AtomICoor.fwd.hh
pose_mod.hh	chemical / AtomICoor.hh
pose_mod.hh	id / AtomID.fwd.hh
pose_mod.hh	id / AtomID.hh
pose_mod.hh	id / AtomID_Map.fwd.hh
pose_mod.hh	id / AtomID_Map.hh
pose_mod.hh	id / AtomID_Mask.fwd.hh
pose_mod.hh	kinematics / AtomPointer.fwd.hh
pose_mod.hh	kinematics / AtomTree.fwd.hh
pose_mod.hh	kinematics / AtomTree.hh
pose_mod.hh	chemical / AtomType.fwd.hh
pose_mod.hh	chemical / AtomType.hh
pose_mod.hh	chemical / AtomTypeSet.fwd.hh
pose_mod.hh	kinematics / AtomWithDOFChange.fwd.hh
pose_mod.hh	conformation / Conformation.fwd.hh
pose_mod.hh	conformation / Conformation.hh
pose_mod.hh	pose / signals / ConformationEvent.fwd.hh
pose_mod.hh	conformation / signals / ConnectionEvent.fwd.hh
pose_mod.hh	conformation / signals / ConnectionEvent.hh
pose_mod.hh	scoring / constraints / Constraint.fwd.hh
pose_mod.hh	scoring / constraints / ConstraintSet.fwd.hh
pose_mod.hh	pose / signals / DestructionEvent.fwd.hh
pose_mod.hh	id / DOF_ID.fwd.hh
pose_mod.hh	id / DOF_ID.hh
pose_mod.hh	id / DOF_ID_Map.fwd.hh
pose_mod.hh	id / DOF_ID_Map.hh
pose_mod.hh	id / DOF_ID_Mask.fwd.hh
pose_mod.hh	kinematics / DomainMap.fwd.hh
pose_mod.hh	kinematics / Edge.fwd.hh
pose_mod.hh	kinematics / Edge.hh
pose_mod.hh	chemical / ElementSet.fwd.hh
pose_mod.hh	scoring / Energies.fwd.hh
pose_mod.hh	pose / signals / EnergyEvent.fwd.hh
pose_mod.hh	kinematics / FoldTree.fwd.hh
pose_mod.hh	kinematics / FoldTree.hh
pose_mod.hh	pose / signals / GeneralEvent.fwd.hh
pose_mod.hh	conformation / signals / GeneralEvent.fwd.hh
pose_mod.hh	conformation / signals / GeneralEvent.hh
pose_mod.hh	chemical / orbitals / ICoorOrbitalData.hh
pose_mod.hh	conformation / signals / IdentityEvent.fwd.hh
pose_mod.hh	conformation / signals / IdentityEvent.hh
pose_mod.hh	kinematics / Jump.fwd.hh
pose_mod.hh	kinematics / Jump.hh
pose_mod.hh	conformation / signals / LengthEvent.fwd.hh
pose_mod.hh	conformation / signals / LengthEvent.hh
pose_mod.hh	kinematics / MinimizerMapBase.fwd.hh
pose_mod.hh	pose / MiniPose.fwd.hh
pose_mod.hh	chemical / MMAtomType.fwd.hh
pose_mod.hh	chemical / MMAtomTypeSet.fwd.hh
pose_mod.hh	chemical / sdf / MolData.fwd.hh
pose_mod.hh	chemical / sdf / MolData.hh
pose_mod.hh	kinematics / MoveMap.fwd.hh
pose_mod.hh	id / NamedAtomID.fwd.hh
pose_mod.hh	id / NamedAtomID.hh
pose_mod.hh	id / NamedStubID.fwd.hh
pose_mod.hh	pose / datacache / ObserverCache.fwd.hh
pose_mod.hh	chemical / orbitals / OrbitalType.fwd.hh
pose_mod.hh	chemical / orbitals / OrbitalTypeSet.fwd.hh
pose_mod.hh	conformation / orbitals / OrbitalXYZCoords.hh
pose_mod.hh	pose / PDBInfo.fwd.hh
pose_mod.hh	pose / Pose.fwd.hh
pose_mod.hh	pose / Pose.hh
pose_mod.hh	pose / metrics / PoseMetricContainer.fwd.hh
pose_mod.hh	conformation / PseudoBond.fwd.hh
pose_mod.hh	chemical / ResConnID.fwd.hh
pose_mod.hh	chemical / ResConnID.hh
pose_mod.hh	conformation / Residue.fwd.hh
pose_mod.hh	conformation / Residue.hh
pose_mod.hh	chemical / ResidueConnection.fwd.hh
pose_mod.hh	chemical / ResidueConnection.hh
pose_mod.hh	kinematics / ResidueCoordinateChangeList.fwd.hh
pose_mod.hh	conformation / ResidueFactory.hh
pose_mod.hh	chemical / ResidueType.fwd.hh
pose_mod.hh	chemical / ResidueType.hh
pose_mod.hh	chemical / ResidueTypeSet.fwd.hh
pose_mod.hh	pack / dunbrack / RotamerLibrary.fwd.hh
pose_mod.hh	kinematics / RT.fwd.hh
pose_mod.hh	kinematics / RT.hh
pose_mod.hh	scoring / ScoreFunction.fwd.hh
pose_mod.hh	scoring / ScoreType.hh
pose_mod.hh	id / SequenceMapping.fwd.hh
pose_mod.hh	kinematics / Stub.fwd.hh
pose_mod.hh	kinematics / Stub.hh
pose_mod.hh	id / TorsionID.fwd.hh
pose_mod.hh	id / types.hh
pose_mod.hh	chemical / types.hh
pose_mod.hh	types.hh
pose_mod.hh	pose / util.hh
pose_mod.hh	pose / util.tmpl.hh
pose_mod.hh	chemical / VariantType.fwd.hh
pose_mod.hh	conformation / signals / XYZEvent.fwd.hh
pose_mod.hh	conformation / signals / XYZEvent.hh
util.cc	chemical / AA.hh
util.cc	scoring / constraints / AtomPairConstraint.hh
util.cc	conformation / Conformation.hh
util.cc	scoring / constraints / ConstraintSet.hh
util.cc	scoring / constraints / CoordinateConstraint.hh
util.cc	graph / DisjointSets.hh
util.cc	kinematics / FoldTree.hh
util.cc	kinematics / MoveMap.hh
util.cc	pack / task / operation / NoRepackDisulfides.hh
util.cc	pack / task / PackerTask.hh
util.cc	pose / PDBInfo.hh
util.cc	pose / PDBPoseMap.hh
util.cc	pose / Pose.hh
util.cc	pack / task / ResfileReader.hh
util.cc	conformation / Residue.hh
util.cc	pack / task / TaskFactory.hh
util.cc	pack / task / operation / TaskOperations.hh
util.cc	types.hh
util.cc	id / types.hh
util.cc	pose / util.hh
util.cc	chemical / VariantType.hh
util.hh	graph / DisjointSets.fwd.hh
util.hh	kinematics / FoldTree.fwd.hh
util.hh	pack / task / PackerTask.fwd.hh
util.hh	pose / Pose.fwd.hh
util.hh	pack / task / TaskFactory.fwd.hh
util.hh	types.hh