Here is a list of all class members with links to the classes they belong to:
- _ -
- __pad0__
: core::scoring::carbon_hbonds::CarbonHBondEnergy
, core::scoring::constraints::ConstraintsEnergy
, core::scoring::disulfides::CentroidDisulfideEnergy
, core::scoring::electron_density::ElecDensCenEnergy
, core::scoring::geometric_solvation::GeometricSolEnergy
, core::scoring::rna::chemical_shift::RNA_ChemicalShiftEnergy
, core::scoring::rna::RG_Energy_RNA
, core::scoring::geometric_solvation::OccludedHbondSolEnergy
, core::scoring::rna::RNA_DataBackboneEnergy
, core::scoring::rna::RNA_FullAtomStackingEnergy
, core::scoring::electron_density::ElecDensEnergy
, core::scoring::geometric_solvation::OccludedHbondSolEnergy_onebody
, core::scoring::rna::RNA_LJ_BaseEnergy
, core::scoring::rna::RNA_Mg_Energy
, core::scoring::hackaro::HackAroEnergy
, core::scoring::rna::RNA_PairwiseLowResolutionEnergy
, core::scoring::rna::RNA_TorsionEnergy
, core::scoring::disulfides::DisulfideMatchingEnergy
, core::scoring::electron_density::FastDensEnergy
, core::scoring::hackelec::HackElecEnergy
, core::scoring::rna::RNA_VDW_Energy
, core::scoring::saxs::FastSAXSEnergy
, core::scoring::hbonds::HBondEnergy
, core::scoring::sym_e::symEnergy
, core::scoring::electron_density::PattersonCorrEnergy
, core::scoring::interface::DDPscore
, core::scoring::MinimizationNode
, core::scoring::custom_pair_distance::FullatomCustomPairDistanceEnergy
, core::scoring::disulfides::FullatomDisulfideEnergy
, core::scoring::electron_density_atomwise::ElecDensAtomwiseEnergy
, core::scoring::MinimizationEdge
, core::scoring::MinimizationGraph
, core::scoring::etable::BaseEtableEnergy< Derived >
, core::scoring::nv::NVscore
, core::scoring::orbitals::OrbitalsScore
, core::scoring::electron_density::ElecDensAllAtomCenEnergy
, core::scoring::geometric_solvation::ContextIndependentGeometricSolEnergy
, core::scoring::packing::HolesEnergy
, core::scoring::packing::HolesEnergyRes
, core::scoring::geometric_solvation::ExactOccludedHbondSolEnergy
, core::scoring::packing::SurfEnergy
, core::scoring::packing::SurfVolEnergy
- __pad1__
: core::scoring::constraints::ConstraintsEnergy
, core::scoring::etable::BaseEtableEnergy< Derived >
, core::scoring::MinimizationNode
- _abs_tolerance
: core::optimization::BrentLineMinimization
- _add_weights_from_file()
: core::scoring::ScoreFunction
- _assignments()
: protocols::noesy_assign::PeakAssignmentResidueMap
- _atom_distance_cb()
: core::scoring::sc::MolecularSurfaceCalculator
- _ax
: core::optimization::BrentLineMinimization
- _BoolMover()
: protocols::moves::_BoolMover
- _bx
: core::optimization::BrentLineMinimization
- _converged
: core::optimization::JJH_Minimizer
- _dE_dvars
: core::optimization::func_1d
- _deriv_count
: core::optimization::func_1d
- _deriv_sum
: core::optimization::LineMinimizationAlgorithm
- _eval_count
: core::optimization::func_1d
- _eval_point
: core::optimization::func_1d
- _func
: core::optimization::JJH_Minimizer
, core::optimization::LineMinimizationAlgorithm
, core::optimization::func_1d
- _func_to_beat
: core::optimization::LineMinimizationAlgorithm
- _get_direction
: core::optimization::JJH_Minimizer
- _get_scored_list()
: protocols::abinitio::Templates
- _last_accepted_step
: core::optimization::LineMinimizationAlgorithm
- _line_min
: core::optimization::JJH_Minimizer
- _nonmonotone
: core::optimization::LineMinimizationAlgorithm
, core::optimization::StrongWolfeLineMinimization
- _notify_archive()
: protocols::jd2::archive::MPIArchiveJobDistributor
- _num_calls
: core::optimization::ArmijoLineMinimization
, core::optimization::StrongWolfeLineMinimization
- _num_linemin_calls
: core::optimization::LineMinimizationAlgorithm
- _pmatch()
: protocols::noesy_assign::Resonance
- _read_constraints()
: protocols::abinitio::Template
- _read_file()
: core::io::silent::SilentFileData
- _search_direction
: core::optimization::func_1d
- _search_direction_magnitude
: core::optimization::func_1d
- _silent
: core::optimization::LineMinimizationAlgorithm
- _starting_point
: core::optimization::func_1d
- _static_type_name()
: protocols::topology_broker::PcsEnergyController
, protocols::topology_broker::FoldandDockClaimer
, protocols::topology_broker::StartStructClaimer
, core::fragment::JumpingFrame
, protocols::topology_broker::DisulfJumpClaimer
, protocols::topology_broker::MembraneTopologyClaimer
, core::fragment::SingleResidueFragData
, core::fragment::BBTorsionAndAnglesSRFD
, protocols::topology_broker::LoopFragmentClaimer
, core::fragment::UpJumpSRFD
, core::fragment::DownJumpSRFD
, protocols::topology_broker::TemplateJumpClaimer
, protocols::topology_broker::AsymFoldandDockClaimer
, protocols::topology_broker::SequenceClaimer
, protocols::topology_broker::ConstraintClaimer
, protocols::topology_broker::FibrilModelingClaimer
, protocols::topology_broker::FragmentClaimer
, protocols::topology_broker::CutBiasClaimer
, protocols::topology_broker::PseudocontactShiftEnergyController
, protocols::topology_broker::CoordConstraintClaimer
, protocols::topology_broker::TemplateFragmentClaimer
, protocols::topology_broker::JumpClaimer
, core::fragment::SecstructSRFD
, protocols::topology_broker::MetalloClaimer
, core::fragment::Frame
, protocols::topology_broker::RigidChunkClaimer
, core::fragment::BBTorsionSRFD
, protocols::topology_broker::DensityScoringClaimer
- _stored_derivatives
: core::optimization::LineMinimizationAlgorithm
- _tolerance
: core::optimization::LineMinimizationAlgorithm
- _write_partner_ids()
: protocols::noesy_assign::FloatingResonance
- _write_silent_struct()
: core::io::silent::SilentFileData
- _write_to_stream()
: protocols::noesy_assign::Resonance
, protocols::canonical_sampling::MultiTemperatureTrialCounter
- _xx
: core::optimization::BrentLineMinimization