- c -

• CacheableData : core::scoring::ResSingleMinimizationData , core::scoring::ResPairMinimizationData
• CacheableDataCOP : core::scoring::ResSingleMinimizationData , core::scoring::ResPairMinimizationData , core::scoring::constraints::CstMinimizationData , core::scoring::ResidueNblistData , core::scoring::ResiduePairNeighborList
• CacheableDataOP : core::scoring::constraints::CstMinimizationData , core::scoring::disulfides::DisulfMinData , core::scoring::ResSingleMinimizationData , core::scoring::ResPairMinimizationData , core::scoring::ResidueNblistData , core::scoring::ResiduePairNeighborList
• CacheMap : core::fragment::Frame
• calc_calcn : protocols::toolbox::task_operations::RestrictByCalculatorsOperation
• CalibratorMap : protocols::noesy_assign::PeakCalibratorMap
• CAP : protocols::genetic_algorithm::Entity
• CAPs : protocols::genetic_algorithm::Entity
• CD_1B_Methods : core::scoring::ScoreFunction
• CD_2B_Methods : core::scoring::ScoreFunction
• CD_LR_2B_MethodIterator : core::scoring::ScoreFunction
• CD_LR_2B_Methods : core::scoring::ScoreFunction
• CellOP : core::sequence::DP_Matrix
• ChiBinComboCountMap : protocols::match::output::SameChiBinComboGrouper
• ChiSetOP : core::pack::rotamer_set::RotamerSet_
• ChiVector : protocols::simple_moves::sidechain_moves::SidechainMoverBase
• Chunks : protocols::nonlocal::SingleFragmentMover
• CI_1B_Methods : core::scoring::ScoreFunction
• CI_2B_Methods : core::scoring::ScoreFunction
• CI_LR_2B_MethodIterator : core::scoring::ScoreFunction
• CI_LR_2B_Methods : core::scoring::ScoreFunction
• ClassicFragmentMoverOP : protocols::forge::remodel::RemodelLoopMover
• Clones : core::conformation::symmetry::SymmetryInfo
• Cluster : protocols::toolbox::ClusterBase
• ClusterDisList : protocols::toolbox::KClusterElement
• ClusterIterator : protocols::toolbox::ClusterBase
• ClusterList : protocols::toolbox::ClusterBase
• ClusterNdxList : protocols::toolbox::KClusterElement
• ClusterPhilStyleOP : protocols::forge::remodel::RemodelAccumulator
• ClusterTypList : protocols::toolbox::KClusterElement
• CompletionMessage : protocols::jd2::archive::ArchiveManager
• CompletionMessages : protocols::jd2::archive::ArchiveManager
• Compounds : core::io::pdb::HeaderInformation
• CompoundStatement : protocols::filters::CompoundFilter
• Conformation : core::chemical::ICoorAtomID , core::conformation::signals::ConnectionEvent , core::conformation::signals::GeneralEvent , core::pose::Pose , core::scoring::constraints::Constraints , core::scoring::constraints::FourPointsFunc , core::scoring::constraints::SequenceProfileConstraint , core::scoring::constraints::XYZ_Func , protocols::constraints_additional::SequenceCoupling1BDConstraint , protocols::constraints_additional::SequenceCouplingConstraint
• ConformationEvent : core::pose::Pose , protocols::boinc::BoincCurrentPoseObserver
• ConformationOP : core::pose::Pose
• ConnectionEvent : core::conformation::Conformation
• ConservationMap : core::pose::datacache::PositionConservedResiduesStore
• const_decoy_iterator : protocols::jd2::archive::ArchiveBase
• const_iterator : protocols::wum::WorkUnitManager , core::optimization::symmetry::SymMinimizerMap , core::pack::task::TaskFactory , core::optimization::MinimizerMap , core::scoring::constraints::Constraints , core::scoring::constraints::ResidueConstraints , core::scoring::dssp::StrandPairingSet , core::scoring::EMapVector , protocols::abinitio::PairingStatistics , protocols::filters::CompoundFilter , protocols::hotspot_hashing::HotspotStubSet , protocols::jumping::JumpSetup , protocols::jumping::ResiduePairJumpSetup , protocols::loops::Loops , protocols::moves::DataMap , protocols::noesy_assign::CrossPeakList , protocols::noesy_assign::MethylNames , protocols::noesy_assign::ResonanceList , protocols::wum::SilentStructStore , protocols::protein_interface_design::movers::ResidueBBDofs , protocols::topology_broker::TopologyBroker , protocols::rosetta_scripts::ParsedProtocol , protocols::wum::WorkUnitQueue , protocols::protein_interface_design::movers::PlacementAuctionMover , protocols::noesy_assign::CrossPeak , protocols::jumping::JumpSelector , protocols::abinitio::Templates , core::coarse::TranslatorSet , core::kinematics::FoldTree
• const_reference : core::id::AtomID_Map< T > , core::id::DOF_ID_Map< T >
• const_residue_iterator : core::chemical::ResidueTypeSet
• ConstantLengthFragSetOP : protocols::forge::components::VarLengthBuild
• ConstBeadIterator : core::coarse::Rule
• ConstDaemonList : protocols::pack_daemon::DaemonSet
• ConstDaemonListIter : protocols::pack_daemon::DaemonSet
• ConstraintCreatorMap : core::scoring::constraints::ConstraintFactory
• ConstraintOP : protocols::constraints_additional::SequenceCoupling1BDConstraint , core::scoring::constraints::SequenceProfileConstraint , protocols::constraints_additional::SequenceCouplingConstraint
• ConstraintSet : protocols::simple_moves::ConstraintSetMover
• ConstraintSetCOP : core::pose::Pose , protocols::simple_moves::ConstraintSetMover
• ConstraintSetOP : core::pose::Pose , protocols::constraints_additional::MaxSeqSepConstraintSet , protocols::simple_moves::ConstraintSetMover , protocols::comparative_modeling::IgnoreSubsetConstraintSet
• ConstReference : core::id::DOF_ID_Map< T > , core::id::AtomID_Map< T >
• ConstTokenIterator : core::coarse::Rule
• Coords : core::io::pdb::FileData
• CoordVector : protocols::evaluation::PCA
• COP : protocols::genetic_algorithm::FitnessFunction , protocols::genetic_algorithm::EntityRandomizer , protocols::genetic_algorithm::Entity , protocols::multistate_design::MultiStateAggregateFunction , protocols::multistate_design::PartitionAggregateFunction< T > , protocols::genetic_algorithm::PositionSpecificRandomizer
• COPs : protocols::genetic_algorithm::Entity
• CornerPoints : protocols::match::Bool3DGrid
• CountPairFunctionCOP : core::scoring::ResidueNblistData
• CrossPeaks : protocols::noesy_assign::CrossPeakList
• CSA_lines : core::scoring::ChemicalShiftAnisotropy
• cstInfoMap : protocols::jumping::ResiduePairJump
• cstInfoMapIterator : protocols::jumping::ResiduePairJump