- k -
- k
: protocols::cluster::Exemplar
- K0_
: core::scoring::methods::BBIndepCartBondedParameters
- k48r_48_lys_
: protocols::ub_e2c::ubi_e2c_modeler
- k48r_48k_mtsl_
: protocols::ub_e2c::ubi_e2c_modeler
- k48r_ctr_of_mass_
: protocols::ub_e2c::ubi_e2c_modeler
- k48r_docking_map_
: protocols::ub_e2c::ubi_e2c_modeler
- k48r_end_
: protocols::ub_e2c::ubi_e2c_modeler
- k48r_swap_
: protocols::ub_e2c::ubi_e2c_modeler
- k48r_trim_end_
: protocols::ub_e2c::ubi_e2c_modeler
- K_
: core::scoring::constraints::KofNConstraint
- k_
: core::scoring::constraints::AmberPeriodicFunc
, core::scoring::constraints::CharmmPeriodicFunc
, core::scoring::constraints::PeriodicFunc
- k_angle_
: core::scoring::methods::IdealParametersDatabase
- k_length_
: core::scoring::methods::IdealParametersDatabase
- k_torsion_
: core::scoring::methods::IdealParametersDatabase
- k_torsion_improper_
: core::scoring::methods::IdealParametersDatabase
- k_torsion_proton_
: core::scoring::methods::IdealParametersDatabase
- Kappa_
: core::scoring::FACTSPotential
- KB_description_
: core::scoring::constraints::SplineFunc
- kDerivativeWindow
: core::scoring::constraints::USOGFunc
- keep_aas_
: core::pack::task::operation::RestrictAbsentCanonicalAAS
, core::pack::task::NOTAA
, protocols::toolbox::task_operations::RestrictIdentitiesAtAlignedPositionsOperation
- keep_adding_to_statistics_
: protocols::jd2::archive::NormalizedEvaluatedArchive
- keep_canonical_aas_
: core::pack::task::PIKAA
- keep_center
: protocols::toolbox::ClusterOptions
- keep_covalent_
: protocols::enzdes::AddOrRemoveMatchCsts
- keep_disulfide_cys_
: protocols::simple_moves::MakePolyXMover
- keep_gly_
: protocols::simple_moves::MakePolyXMover
- keep_history_
: protocols::moves::PyMolMover
- keep_input_foldtree_
: protocols::forge::remodel::RemodelLoopMover
- keep_input_protonation_state_
: core::io::pdb::FileDataOptions
- keep_known_bb_torsions_at_junctions_
: protocols::forge::build::SegmentInsert
, protocols::forge::build::SegmentRebuild
- keep_nas_
: core::pack::task::PIKNA
- keep_pose_in_memory_
: protocols::swa::rna::StepWiseRNA_Clusterer
- keep_pose_in_memory_hydrid_
: protocols::swa::rna::StepWiseRNA_Clusterer
- keep_pro_
: protocols::simple_moves::MakePolyXMover
- keep_rnas_
: core::pack::task::PIKRNA
- keep_rnl_pose_
: protocols::enzdes::EnzdesScorefileFilter
- key
: protocols::loophash::LeapIndex
- key_
: protocols::multistate_design::MetricCalculatorFitnessFunction
, protocols::toolbox::pose_metric_calculators::MetricValueGetter
, protocols::frag_picker::VallResidue
- keyword_in_progress_
: core::io::pdb::HeaderInformation
- keywords_
: core::io::pdb::HeaderInformation
- kic_
: protocols::seeded_abinitio::CloseFold
- kill_antiparallel_
: core::scoring::SS_Killhairpins_Info
- kill_parallel_
: core::scoring::SS_Killhairpins_Info
- kind
: core::scoring::packstat::Event
- kinemage_file_name_
: protocols::match::output::WriteUpstreamHitKinemage
, protocols::match::output::WriteUpstreamCoordinateKinemage
- kinematic_control_
: protocols::abinitio::Protocol
- kinematic_mover_
: protocols::enzdes::EnzdesFlexBBProtocol
, protocols::protein_interface_design::movers::PlaceOnLoop
- kinked_
: protocols::antibody::Antibody
- kinmover_
: protocols::loops::loop_closure::kinematic_closure::KinematicWrapper
, protocols::loops::loop_closure::kinematic_closure::KinematicPerturber
- kMinGaussianScore
: core::scoring::constraints::USOGFunc
- known_atoms_
: core::scoring::saxs::FormFactorManager
- Ks_spline_
: core::scoring::methods::BBDepCartBondedParameters
- kT_
: core::sequence::MCAligner
, protocols::swa::monte_carlo::RNA_SWA_MonteCarloMover
, protocols::optimize_weights::PNatLigPoseOptEData
, protocols::surface_docking::FullatomRelaxMover
, protocols::swa::monte_carlo::RNA_AddMover
, protocols::surface_docking::CentroidRelaxMover
- Ktheta_
: core::scoring::mm::MMBondAngleResidueTypeParam