- f -
- foreach
: AtomTypeDatabaseIO.cc
, RestrictToAlignedSegments.cc
, RestrictResiduesToRepackingOperation.cc
, RestrictIdentitiesAtAlignedPositions.cc
, PreventResiduesFromRepackingOperation.cc
, DesignAroundOperation.cc
, RotamerBoltzCalculator.cc
, SwitchChainOrderMover.cc
, MinMover.cc
, GenericMonteCarloMover.cc
, ForceDisulfidesMover.cc
, DesignRepackMover.cc
, CutChainMover.cc
, RotamerBoltzmannWeight.cc
, ResiduesInInterfaceFilter.cc
, ResidueIEFilter.cc
, ResidueBurialFilter.cc
, RelativePoseFilter.cc
, OperatorFilter.cc
, InterfaceSasaFilter.cc
, FileRemoveFilter.cc
, BuriedUnsatHbondFilter.cc
, SwapSegment.cc
, SegmentHybridizer.cc
, SeedSetupMover.cc
, SeedFoldTree.cc
, GrowPeptides.cc
, DefineMovableLoops.cc
, CoordinateCst.cc
, CloseFold.cc
, CAcstGenerator.cc
, RotamerRecoveryFactory.cc
, util.cc
, ParsedProtocol.cc
, RollMover.cc
, ScoringGridLoader.cc
, util.cc
, TryRotamers.cc
, TaskAwareCsts.cc
, SpliceSegment.cc
, Splice.cc
, ShoveResidueMover.cc
, SetupHotspotConstraintsMover.cc
, SetupHotspotConstraintsLoopsMover.cc
, RandomMutation.cc
, ProteinInterfaceMultiStateDesignMover.cc
, PlaceUtils.cc
, PlaceStubMover.cc
, PlaceSimultaneouslyMover.cc
, PlaceOnLoop.cc
, PlacementMinimizationMover.cc
, PlacementAuctionMover.cc
, MapHotspot.cc
, HotspotDisjointedFoldTreeMover.cc
, FavorNonNativeResiduePreCycle.cc
, FavorNativeResiduePreCycle.cc
, BackrubDDMover.cc
, AddSidechainConstraintsToHotspots.cc
, AddChainBreak.cc
, TorsionFilter.cc
, StubScoreLoopsFilter.cc
, StubScoreFilter.cc
, HbondsToResidueFilter.cc
, FilterScan.cc
, BoltzmannFilter.cc
, ResId.cc
, util.cc
, LoopsExplicitDefiner.cc
, LoopsDefinerLoader.cc
, LoopsDefinerFactory.cc
, LoopMover_CCD.cc
, KinematicMover.cc
, LoopHashMoverWrapper.cc
, UnconstrainedTorsionsMover.cc
, Translate.cc
, StartFrom.cc
, SlideTogether.cc
, Rotates.cc
, Rotate.cc
, ResidueTorsionRestraints.cc
, MoveMapBuilder.cc
, MinimizeBackbone.cc
, LigandDockingLoaders.cc
, LigandDesign.cc
, ligand_scores.cc
, Interface.cc
, InterfaceScoreCalculator.cc
, InterfaceBuilder.cc
, HighResDocker.cc
, GrowLigand.cc
, CompoundTranslate.cc
, AddHydrogens.cc
, SilentFileJobOutputter.cc
, ScoreOnlyJobOutputter.cc
, TaskOperationLoader.cc
, ScoreFunctionLoader.cc
, MonteCarloLoader.cc
, FragSetLoader.cc
, JD2ResourceManager.cc
, DockDesignParser.cc
, AtomTreeDiffJobInputter.cc
, HybridizeProtocol.cc
, HotspotStubSet.cc
, MatchResiduesMover.cc
, MatchResidues.cc
, Filter.cc
, CalculatorFilter.cc
, BasicFilters.cc
, UnrecognizedAtomFeatures.cc
, ResidueTypesFeatures.cc
, ReportToDB.cc
, ProteinSilentReport.cc
, ProteinRMSDFeatures.cc
, PoseConformationFeatures.cc
, PoseCommentsFeatures.cc
, OrbitalsFeatures.cc
, HBondParameterFeatures.cc
, HBondFeatures.cc
, FeaturesReporterFactory.cc
, FeaturesReporter.cc
, DatabaseJobInputter.cc
, BetaTurnDetectionFeatures.cc
, AtomTypesFeatures.cc
, EvaluatorFactory.cc
, enzdes_util.hh
, enzdes_util.cc
, PointMutationCalculator.cc
, ParetoOptMutationMover.cc
, GreedyOptMutationMover.cc
, LoopRelaxMover.cc
, rms_util.tmpl.hh
, hbonds.cc
, HBondDatabase.cc
, util.cc
, selection.cc
, cacheable_observers.cc
, TaskFactory.cc
, TaskOperations.cc
, pose_io.cc
, PDBPoseInputStream.cc
, import_pose.cc
, atom_tree_diff.cc
, Residue.cc
, Conformation.cc
, v3_parser.cc
, sdf_parser.cc
, MolData.cc
, mol_writer.cc
, ctab_parser.cc
, ResidueTypeSet.cc
, ResidueDatabaseIO.cc
, residue_io.cc