- t -

• TableEnergy : core::scoring
• TableProbability : core::scoring
• TabooSamplingKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
• TabooSamplingKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
• TagPtr : protocols::filters , protocols::jd2
• TagPtrs : protocols::jd2
• TagScoreMap : core::import_pose::atom_tree_diffs
• TagScorePair : core::import_pose::atom_tree_diffs
• TargetRotamerCoordsCOP : protocols::match::downstream
• TargetRotamerCoordsOP : protocols::match::downstream
• TaskAwareCstsCOP : protocols::protein_interface_design::movers
• TaskAwareCstsOP : protocols::protein_interface_design::movers
• TaskAwareMinMoverCOP : protocols::simple_moves
• TaskAwareMinMoverOP : protocols::simple_moves
• TaskFactoryCOP : core::pack::task
• TaskFactoryOP : core::pack::task
• TaskFactorySP : core::pack::task
• TaskOperationCOP : core::pack::task::operation
• TaskOperationCreatorCOP : core::pack::task::operation
• TaskOperationCreatorOP : core::pack::task::operation
• TaskOperationFactoryCOP : core::pack::task::operation
• TaskOperationFactoryOP : core::pack::task::operation
• TaskOperationOP : core::pack::task::operation
• TaskOperationSP : core::pack::task::operation
• TemlateAssemblyCOP : protocols::hybridization
• TemlateAssemblyOP : protocols::hybridization
• TemperatureControllerAP : protocols::moves
• TemperatureControllerCAP : protocols::moves
• TemperatureControllerCOP : protocols::canonical_sampling , protocols::moves
• TemperatureControllerOP : protocols::canonical_sampling , protocols::moves
• TemperedDockingOP : protocols::docking
• TemperingBaseAP : protocols::canonical_sampling
• TemperingBaseCAP : protocols::canonical_sampling
• TemperingBaseCOP : protocols::canonical_sampling
• TemperingBaseOP : protocols::canonical_sampling
• TemplateCOP : protocols::abinitio
• TemplateFragmentClaimerAP : protocols::topology_broker
• TemplateFragmentClaimerCAP : protocols::topology_broker
• TemplateFragmentClaimerCOP : protocols::topology_broker
• TemplateFragmentClaimerOP : protocols::topology_broker
• TemplateHistoryCOP : protocols::hybridization
• TemplateHistoryOP : protocols::hybridization
• TemplateJumpClaimerAP : protocols::topology_broker
• TemplateJumpClaimerCAP : protocols::topology_broker
• TemplateJumpClaimerCOP : protocols::topology_broker
• TemplateJumpClaimerOP : protocols::topology_broker
• TemplateJumpSetupCOP : protocols::abinitio
• TemplateJumpSetupOP : protocols::abinitio
• TemplateOP : protocols::abinitio
• TemplatesCOP : protocols::abinitio
• TemplatesOP : protocols::abinitio
• TenANeighborGraphCOP : core::scoring
• TenANeighborGraphOP : core::scoring
• Tensor : core::scoring , protocols::scoring
• Tensor5 : core::scoring
• TermInfo : protocols::sic_dock
• TetherLigandCOP : protocols::ligand_docking
• TetherLigandCOPs : protocols::ligand_docking
• TetherLigandOP : protocols::ligand_docking
• TetherLigandOPs : protocols::ligand_docking
• ThermodynamicMoverCOP : protocols::canonical_sampling
• ThermodynamicMoverOP : protocols::canonical_sampling
• ThermodynamicObserverCOP : protocols::canonical_sampling
• ThermodynamicObserverOP : protocols::canonical_sampling
• ThreadingJobCOP : protocols::comparative_modeling
• ThreadingJobInputterCOP : protocols::comparative_modeling
• ThreadingJobInputterOP : protocols::comparative_modeling
• ThreadingJobOP : protocols::comparative_modeling
• ThreadSequenceOperationCOP : protocols::toolbox::task_operations
• ThreadSequenceOperationOP : protocols::toolbox::task_operations
• three_atom_set : core::chemical , core::scoring::mm
• TimeEvaluatorCOP : protocols::evaluation
• TimeEvaluatorOP : protocols::evaluation
• TopologyBrokerAP : protocols::topology_broker
• TopologyBrokerCAP : protocols::topology_broker
• TopologyBrokerCOP : protocols::topology_broker
• TopologyBrokerOP : protocols::topology_broker
• TopologyClaimerAP : protocols::topology_broker
• TopologyClaimerCAP : protocols::topology_broker
• TopologyClaimerCOP : protocols::topology_broker
• TopologyClaimerOP : protocols::topology_broker
• TopOutFuncCOP : core::scoring::constraints
• TopOutFuncOP : core::scoring::constraints
• TorsionBinSimilarityCOP : protocols::frag_picker::scores
• TorsionBinSimilarityOP : protocols::frag_picker::scores
• TorsionCOP : protocols::protein_interface_design::filters
• TorsionDOFMoverCOP : protocols::simple_moves
• TorsionDOFMoverOP : protocols::simple_moves
• TorsionFeatureCOP : protocols::comparative_modeling::features
• TorsionFeatureOP : protocols::comparative_modeling::features
• TorsionFourierComponentCOP : core::scoring::dna
• TorsionFourierComponentOP : core::scoring::dna
• TorsionFragmentLibraryCOP : protocols::frags
• TorsionFragmentLibraryOP : protocols::frags
• TorsionFragmentOP : protocols::frags
• TorsionInfo : core::fragment
• TorsionInfoList : core::fragment
• TorsionInfoSetCOP : core::fragment
• TorsionOP : protocols::protein_interface_design::filters
• TorsionRestrictedKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
• TorsionRestrictedKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
• TorsionSamplingKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
• TorsionSamplingKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
• TorsionSweepingKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
• TorsionSweepingKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
• traceIter : core::scoring::packstat
• traces : core::scoring::packstat
• TrajectoryRecorderOP : protocols::canonical_sampling
• TranslateCOP : protocols::ligand_docking
• TranslateCOPs : protocols::ligand_docking
• TranslateOP : protocols::ligand_docking
• TranslateOPs : protocols::ligand_docking
• TranslatorCAP : core::coarse
• TranslatorCOP : core::coarse
• TranslatorOP : core::coarse
• TranslatorSetCOP : core::coarse
• TranslatorSetOP : core::coarse
• TreeBuilderCOP : protocols::nonlocal
• TreeBuilderOP : protocols::nonlocal
• TrialMoverCOP : protocols::moves
• TrialMoverOP : protocols::moves
• TrieCollectionCOP : core::scoring::trie
• TrieCollectionOP : core::scoring::trie
• TrieCountPairBaseCOP : core::scoring::trie
• TrieCountPairBaseOP : core::scoring::trie
• TrieCountPairGenericCOP : core::scoring::etable::etrie
• TrieCountPairGenericOP : core::scoring::etable::etrie
• Trig : core
• Trigger : protocols::medal
• Triggers : protocols::simple_moves::rational_mc
• TwelveANeighborGraphCOP : core::scoring
• TwelveANeighborGraphOP : core::scoring
• two_atom_set : core::scoring::mm , core::chemical
• TwoBodyEnergyCOP : core::scoring::methods
• TwoBodyEnergyOP : core::scoring::methods
• TypesMap : protocols::dna